Oncology Test Menu

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Chromosome Analysis

• 811 Chromosome Analysis, Unstimulated Blood, for Hematologic Disorders
• 812 Chromosome Analysis, Bone Marrow, for Hematologic Disorders
• 836 Chromosome Analysis, Tumor/Pleural Effusion/ Ascites fluid, for Neoplastic Disorders

Molecular Analysis

• 887M31 RT-PCR for BCR/ABL1 Fusion Transcript, t(9;22)(q34;q11.2)
• 887M35 RT-PCR for PML/RARA Fusion Transcript, t(15;17)(q24;q21)
• 893M51/52 Quantitative PCR for BCR/ABL1, t(9;22)(q34;q11.2) Diagnostic
• 893M51/52 Quantitative PCR for BCR/ABL1, t(9;22)(q34;q11.2) Monitoring
• 890ONC Illumina Microarray Analysis- Oncology

FISH Analysis Paraffin Sections (FFPE)*

• 883 ERBB2 (HER2) Gene Amplification Status
• 883F2 MDM2 Gene Amplification Status
• 886F5 Deletion 1p36 for glial neoplasia
• 886F6 Deletion 19q13 for glial neoplasia
• 886F7 Deletion 17p13.1, TP53/17CEN for Lymphoma
• 886F8 BRAF Gene Rearrangement, 7q34

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FISH Analysis (Panels)

• MYELOMA PANEL includes
  • 882F82 IGH Gene Rearrangement, 14q32
  • 881F62 CCND1/IGH Fusion, t(11;14)(q13;q32)
  • 881F69 FGFR3/IGH Fusion, t(4;14)(p16;q32)
  • 881F70 IGH/MAF Fusion, t(14;16)(q32;q23)
  • 881F72 IGH/MAFB t(14;20)(q32;q12)
  • 870F40 11q22 Deletion/Duplication, ATM gene
  • 870F43 Deletion 13q14, D13S319
  • 870F47 Deletion 17p13.1, TP53
  • 870F55 Gain 1q21 for myeloma

• MYELOMA HYPERDIPLOIDY PANEL includes
  • 870F45 EGR1 5q31 (for trisomy 5 detection)
  • 870F42 D7S522  7q31 (for trisomy 7 detection)

• MDS PANEL includes
  • 870F45 Deletion 5q31, EGR1
  • 870F42 Deletion 7q31, D7S522
  • 870F41 Trisomy 8, D8Z2
  • 870F44 Deletion 20q, D20S108

• AML PANEL includes
  • 870F45 Deletion 5q31, EGR1
  • 870F42 Deletion 7q31, D7S522
  • 881F63 RUNX1T1/RUNX1 Fusion, t(8;21)(q22;q22)
  • 882F80 CBFB Gene Rearrangement, 16q22
  • 882F84 KMT2A (MLL) Gene Rearrangement, 11q23

• CORE BINDING FACTOR PANEL includes
  • 881F63 RUNX1T1/RUNX1 Fusion, t(8;21)(q22;q22)
  • 882F80 CBFB Gene Rearrangement, 16q22

• CLL PANEL includes
  • 870F40 11q22 Deletion/Duplication, ATM gene
  • 870F43 Deletion 13q14, D13S319
  • 870F47 Deletion 17p13.1, TP53
  • 870F51 Trisomy 12, D12Z3

• ALL PANEL includes
  • 881F67 ETV6/RUNX1 Fusion, t(12;21)(p13;q22)
  • 881F61 BCR/ABL1 Fusion, t(9;22)(q34;q11.2)
  • 870F48 Trisomy 4, CEP4
  • 870F49 Trisomy 10, CEP10
  • 870F50 Trisomy 17, D17Z1
  • 882F84 KMT2A (MLL) Gene Rearrangement, 11q23

• HIGH RISK PEDIATRIC ALL PANEL includes
  • 882F90 PDGFRb Gene Rearrangement, 5q33
  • 882F98 ABL1 Gene Rearrangement, 9q34
  • 882F99 ABL2 Gene Rearrangement, 1q25.2

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FISH Analysis

see also FISH probes by chromosome and FISH probes by use category including CPT codes

• 870F40 11q22 Deletion/Duplication, ATM gene
• 870F41 Trisomy 8, D8Z2
• 870F42 Deletion 7q31, D7S522
• 870F43 Deletion 13q14, D13S319
• 870F44 Deletion 20q, D20S108
• 870F45 Deletion 5q31, EGR1
• 870F46 Deletion 9p21, P16
• 870F47 Deletion 17p13.1, TP53
• 870F48 Trisomy 4, CEP4
• 870F49 Trisomy 10, CEP10
• 870F50 Trisomy 17, D17Z1
• 870F51 Trisomy 12, D12Z3
• 870F52 X and Y sex chromosomes
• 870F55 Gain 1q21 for myeloma
• 881F60 AP12/MALT1 Fusion, t(11;18)(q21;q21)
• 881F61 BCR/ABL1 Fusion, t(9;22)(q34;q11.2)
• 881F62 CCND1/IGH Fusion, t(11;14)(q13;q32) *
• 881F63 RUNX1T1/RUNX1 Fusion, t(8;21)(q22;q22)
• 881F64 IGH/BCL2 Fusion, t(14;18)(q32;q21) *
• 881F65 MYC/IGH Fusion, t(8;14)(q24;q32) *
• 881F66 PML/RARA Fusion, t(15;17)(q24;q21)
• 881F67 ETV6/RUNX1 Fusion, t(12;21)(p13;q22)
• 881F68 IGH/MALT1 Fusion, t(14;18)(q32;q21)
• 881F69 FGFR3/IGH Fusion, t(4;14)(p16;q32)
• 881F70 IGH/MAF Fusion, t(14;16)(q32;q23)
• 881F71 BCR/ABL1+ASS Tri-color Fusion, t(9;22)
• 881F72 IGH/MAFB t(14;20)(q32;q12)
• 882F78 NUP98 Gene Rearrangement, 11p15.4
• 882F79 MECOM Gene Rearrangement, 3q26.2
• 882F80 CBFB Gene Rearrangement, 16q22
• 882F81 EWSR1 Gene Rearrangement, 22q12.2 *
• 882F82 IGH Gene Rearrangement, 14q32 *
• 882F83 MALT1 Gene Rearrangement, 18q21 *
• 882F84 KMT2A (MLL) Gene Rearrangement, 11q23
• 882F85 MYC Gene Rearrangement, 8q24 *
• 882F86 SS18 Gene Rearrangement, 18q11.2 *
• 882F88 BCL6 Gene Rearrangement, 3q27 *
• 882F89 FIP1L1-CHIC2-PDGFRa Gene Rearrangement 4q12
• 882F90 PDGFRb Gene Rearrangement, 5q33
• 882F91 TRA/D Gene Rearrangement, 14q11.2
• 882F92 RARA Gene Rearrangement, 17q21
• 882F93 FGFR1 Gene Rearrangement, 8p11
• 882F94 DDIT3 (CHOP) Gene Rearrangement, 12q13 *
• 882F95 FUS Gene Rearrangement, 16p11 *
• 882F96 BCL2 Gene Rearrangement, 18q21.2 *
• 882F97 CRLF2 Gene Rearrangement, Xp22.33/Yp11.23
• 882F98 ABL1 Gene Rearrangement, 9q34
• 882F99 ABL2 Gene Rearrangement, 1q25.2

 red asterisk * denotes probes also validated for use on FFPE

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